Package: Certara.Xpose.NLME 2.0.2
Certara.Xpose.NLME: Enhances 'xpose' Diagnostics for Pharmacometric Models from 'Certara.RsNLME' and Phoenix NLME
Facilitates the creation of 'xpose' data objects from Nonlinear Mixed Effects (NLME) model outputs produced by 'Certara.RsNLME' or Phoenix NLME. This integration enables users to utilize all 'ggplot2'-based plotting functions available in 'xpose' for thorough model diagnostics and data visualization. Additionally, the package introduces specialized plotting functions tailored for covariate model evaluation, extending the analytical capabilities beyond those offered by 'xpose' alone.
Authors:
Certara.Xpose.NLME_2.0.2.tar.gz
Certara.Xpose.NLME_2.0.2.zip(r-4.5)Certara.Xpose.NLME_2.0.2.zip(r-4.4)Certara.Xpose.NLME_2.0.2.zip(r-4.3)
Certara.Xpose.NLME_2.0.2.tgz(r-4.5-any)Certara.Xpose.NLME_2.0.2.tgz(r-4.4-any)Certara.Xpose.NLME_2.0.2.tgz(r-4.3-any)
Certara.Xpose.NLME_2.0.2.tar.gz(r-4.5-noble)Certara.Xpose.NLME_2.0.2.tar.gz(r-4.4-noble)
Certara.Xpose.NLME_2.0.2.tgz(r-4.4-emscripten)Certara.Xpose.NLME_2.0.2.tgz(r-4.3-emscripten)
Certara.Xpose.NLME.pdf |Certara.Xpose.NLME.html✨
Certara.Xpose.NLME/json (API)
| # Install 'Certara.Xpose.NLME' in R: |
| install.packages('Certara.Xpose.NLME', repos = c('https://certara-jcraig.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/certara/r-xpose-nlme/issues
Pkgdown site:https://certara.github.io
- xpdb_ex_Nlme - XposeNlme examples
Last updated 24 days agofrom:0bb5d8373a. Checks:8 OK. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Jan 29 2025 |
| R-4.5-win | OK | Jan 29 2025 |
| R-4.5-mac | OK | Jan 29 2025 |
| R-4.5-linux | OK | Jan 29 2025 |
| R-4.4-win | OK | Jan 29 2025 |
| R-4.4-mac | OK | Jan 29 2025 |
| R-4.3-win | OK | Jan 29 2025 |
| R-4.3-mac | OK | Jan 29 2025 |
Exports:eta_vs_covget_overallNlmeget_prmNlmenlme.cov.splomnlme.par.vs.covnlme.ranpar.vs.covnlme.var.vs.covprm_vs_covres_vs_covxplot_boxxposeNlmexposeNlmeModel
Dependencies:bitbit64classclassIntclicliprcolorspacecpp11crayondplyre1071eggfansifarverforcatsgenericsGGallyggforceggplot2ggstatsgluegridExtragtablehmsisobandjsonliteKernSmoothlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepatchworkpillarpkgconfigplyrpolyclipprettyunitsprogressproxypurrrR6RColorBrewerRcppRcppEigenreadrrlangscalesstringistringrsurvivalsystemfontstibbletidyrtidyselecttweenrtzdbutf8vctrsviridisLitevpcvroomwithrxpose
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| ETAs vs covariate Plot | eta_vs_cov |
| Access NLME model overall fit results | get_overallNlme |
| Access NLME model parameter estimates | get_prmNlme |
| Create covariates scatterplot | nlme.cov.splom |
| Plot parameter estimates against covariates | nlme.par.vs.cov |
| Plot random parameter estimates against covariates | nlme.ranpar.vs.cov |
| Build multiple plots for selected variable vs covariates | nlme.var.vs.cov |
| Parameter vs covariate Plot | prm_vs_cov |
| Residuals vs covariate plot | res_vs_cov |
| XposeNlme examples | xpdb_ex_Nlme |
| Default xpose box plot function | xplot_box |
| Creates xpose database from Certara.RsNLME output files | xposeNlme |
| Creates xpose database from Certara.RsNLME objects | xposeNlmeModel |
