Package: Certara.NLME8 1.2.4
Certara.NLME8: Utilities for Certara's Nonlinear Mixed-Effects Modeling Engine
Perform Nonlinear Mixed-Effects (NLME) Modeling using Certara's NLME-Engine. Access the same Maximum Likelihood engines used in the Phoenix platform, including algorithms for parametric methods, individual, and pooled data analysis <https://www.certara.com/app/uploads/2020/06/BR_PhoenixNLME-v4.pdf>. The Quasi-Random Parametric Expectation-Maximization Method (QRPEM) is also supported <https://www.page-meeting.org/default.asp?abstract=2338>. Execution is supported both locally or on remote machines. Remote execution includes support for Linux Sun Grid Engine (SGE), Terascale Open-source Resource and Queue Manager (TORQUE) grids, Linux and Windows multicore, and individual runs.
Authors:
Certara.NLME8_1.2.4.tar.gz
Certara.NLME8_1.2.4.zip(r-4.5)Certara.NLME8_1.2.4.zip(r-4.4)Certara.NLME8_1.2.4.zip(r-4.3)
Certara.NLME8_1.2.4.tgz(r-4.4-any)Certara.NLME8_1.2.4.tgz(r-4.3-any)
Certara.NLME8_1.2.4.tar.gz(r-4.5-noble)Certara.NLME8_1.2.4.tar.gz(r-4.4-noble)
Certara.NLME8_1.2.4.tgz(r-4.4-emscripten)Certara.NLME8_1.2.4.tgz(r-4.3-emscripten)
Certara.NLME8.pdf |Certara.NLME8.html✨
Certara.NLME8/json (API)
| # Install 'Certara.NLME8' in R: |
| install.packages('Certara.NLME8', repos = c('https://certara-jcraig.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 1 years agofrom:9ab6ab6ac1. Checks:OK: 3 NOTE: 4. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 08 2024 |
| R-4.5-win | NOTE | Sep 08 2024 |
| R-4.5-linux | NOTE | Sep 08 2024 |
| R-4.4-win | NOTE | Sep 08 2024 |
| R-4.4-mac | NOTE | Sep 08 2024 |
| R-4.3-win | OK | Sep 08 2024 |
| R-4.3-mac | OK | Sep 08 2024 |
Exports:checkGCCcheckInstallDircheckLicenseFilecheckMPISettingscheckRootDirgetTableNamesperformBootstrapperformEstimationOnSortColumnsperformParallelNLMERunperformProfileEstimationperformShotgunCovarSearchperformStepwiseCovarSearchreconnectToBootstrapNLMERunUpdateMDLfrom_dmptxt
Dependencies:backportsbase64urlbatchtoolsbrewcheckmateclicrayondata.tabledigestfsgluehmslifecyclepkgconfigplyrprettyunitsprogressR6rappdirsRcppreshaperlangstringivctrswithrxml2
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Checks the local host for GCC version in the path | checkGCC |
| Checks the given directory for the files required for NLME run | checkInstallDir |
| Checks if NLME run is licensed | checkLicenseFile |
| Check MPI settings for the given local host | checkMPISettings |
| Check NLME ROOT DIRECTORY for the given local host | checkRootDir |
| Table names from the column definition file | getTableNames |
| NLME Bootstrap Function | performBootstrap |
| Sort specification for multiple estimations | performEstimationOnSortColumns |
| Runs a set of NLME jobs in parallel | performParallelNLMERun |
| NLME a profile estimation run on list of fixed effects | performProfileEstimation |
| Shotgun covariate search | performShotgunCovarSearch |
| NLME stepwise covariate search | performStepwiseCovarSearch |
| Use to reconnect to a grid job | reconnectToBootstrapNLMERun |
| Update Model text file from NLME output File | UpdateMDLfrom_dmptxt |
