{
  "_id": "6a1bef101d7bb097a0a21ccb",
  "Package": "Certara.DarwinReporter",
  "Title": "Data Visualization Utilities for 'pyDarwin' Machine Learning\nPharmacometric Model Development",
  "Version": "2.0.1",
  "Authors@R": "c(\nperson(\"James\", \"Craig\", email = \"james.craig@certara.com\", role = c(\"aut\", \"cre\")),\nperson(\"Michael\", \"Tomashevskiy\", email = \"michael.tomashevskiy@certara.com\", role = c(\"aut\")),\nperson(\"Mike\", \"Talley\", email = \"mike.talley@certara.com\", role = c(\"aut\")),\nperson(\"Certara USA, Inc\", role = c(\"cph\",\"fnd\"))\n)",
  "Description": "Utilize the 'shiny' interface for visualizing results from\na 'pyDarwin' (<https://certara.github.io/pyDarwin/>) machine\nlearning pharmacometric model search. It generates\nGoodness-of-Fit plots and summary tables for selected models,\nallowing users to customize diagnostic outputs within the\ninterface. The underlying R code for generating plots and\ntables can be extracted for use outside the interactive\nsession. Model diagnostics can also be incorporated into an R\nMarkdown document and rendered in various output formats.",
  "URL": "https://certara.github.io/R-DarwinReporter/",
  "License": "LGPL-3",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.2",
  "Config/testthat/edition": "3",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-31 08:03:46 UTC",
    "User": "root"
  },
  "Author": "James Craig [aut, cre], Michael Tomashevskiy [aut], Mike Talley\n[aut], Certara USA, Inc [cph, fnd]",
  "Maintainer": "James Craig <james.craig@certara.com>",
  "Config/pak/sysreqs": "libcairo2-dev cmake libfontconfig1-dev\nlibfreetype6-dev libfribidi-dev make libharfbuzz-dev libicu-dev\nlibjpeg-dev libpng-dev libtiff-dev libuv1-dev libwebp-dev\nlibxml2-dev libssl-dev libx11-dev zlib1g-dev",
  "Repository": "https://certara-jcraig.r-universe.dev",
  "Date/Publication": "2025-03-07 16:40:13 UTC",
  "RemoteUrl": "https://github.com/cran/Certara.DarwinReporter",
  "RemoteRef": "HEAD",
  "RemoteSha": "38fdff3bcca9031e592ccfea23111c74ff065962",
  "MD5sum": "c00ad20d670e33e08c7409fc3d1a3173",
  "_user": "certara-jcraig",
  "_type": "src",
  "_file": "Certara.DarwinReporter_2.0.1.tar.gz",
  "_fileid": "cff1a43e9a529ab89f294149ecb7287e2deeff294a6ce210c131f0f2af314869",
  "_filesize": 216580,
  "_sha256": "cff1a43e9a529ab89f294149ecb7287e2deeff294a6ce210c131f0f2af314869",
  "_created": "2026-05-31T08:03:46.000Z",
  "_published": "2026-05-31T08:19:28.623Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78710727049,
      "time": 185,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7315079402"
    },
    {
      "job": 78710727052,
      "time": 203,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7315081900"
    },
    {
      "job": 78710727048,
      "time": 107,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7315132127"
    },
    {
      "job": 78710727043,
      "time": 96,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7315164491"
    },
    {
      "job": 78710482594,
      "time": 246,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7315057311"
    },
    {
      "job": 78710727039,
      "time": 175,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7315078086"
    },
    {
      "job": 78710727056,
      "time": 116,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7315071270"
    },
    {
      "job": 78710727063,
      "time": 147,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7315074602"
    },
    {
      "job": 78710727059,
      "time": 125,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7315072177"
    }
  ],
  "_buildurl": "https://github.com/r-universe/certara-jcraig/actions/runs/26707136882",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/Certara.DarwinReporter",
  "_commit": {
    "id": "38fdff3bcca9031e592ccfea23111c74ff065962",
    "author": "James Craig <james.craig@certara.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 2.0.1\n",
    "time": 1741365613
  },
  "_maintainer": {
    "name": "James Craig",
    "email": "james.craig@certara.com",
    "login": "certara-jcraig",
    "description": "",
    "uuid": 61294078
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "DT",
      "role": "Imports"
    },
    {
      "package": "colourpicker",
      "role": "Imports"
    },
    {
      "package": "shinyAce",
      "role": "Imports"
    },
    {
      "package": "shinymeta",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "xpose",
      "role": "Imports"
    },
    {
      "package": "Certara.Xpose.NLME",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "jsonlite",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "flextable",
      "role": "Imports"
    },
    {
      "package": "shinyjqui",
      "role": "Imports"
    },
    {
      "package": "grDevices",
      "role": "Imports"
    },
    {
      "package": "plotly",
      "role": "Imports"
    },
    {
      "package": "scales",
      "role": "Imports"
    },
    {
      "package": "shiny",
      "version": ">= 1.7.0",
      "role": "Imports"
    },
    {
      "package": "shinyjs",
      "role": "Imports"
    },
    {
      "package": "shinyWidgets",
      "role": "Imports"
    },
    {
      "package": "bslib",
      "version": ">= 0.7.0",
      "role": "Imports"
    },
    {
      "package": "shinyTree",
      "version": ">= 0.3.1",
      "role": "Imports"
    },
    {
      "package": "sortable",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "data.table",
      "role": "Suggests"
    },
    {
      "package": "readr",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "certara-jcraig",
      "count": 1,
      "uuid": 61294078
    }
  ],
  "_userbio": {
    "uuid": 61294078,
    "type": "user",
    "name": "James Craig"
  },
  "_downloads": {
    "count": 170,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/Certara.DarwinReporter"
  },
  "_devurl": "https://github.com/certara/r-darwinreporter",
  "_pkgdown": "https://certara.github.io/R-DarwinReporter/",
  "_searchresults": 0,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/Certara.DarwinReporter.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_realowner": "certara-jcraig",
  "_cranurl": false,
  "_releases": [
    {
      "version": "2.0.1",
      "date": "2025-03-07"
    }
  ],
  "_exports": [
    "darwin_data",
    "darwinReportUI",
    "fitness_penalties_vs_iteration",
    "fitness_vs_iteration",
    "get_eps_shk",
    "get_eta_shk",
    "import_key_models",
    "summarise_fitness_by_iteration",
    "summarise_fitness_penalties_by_iteration",
    "summarise_overall_by_key_models",
    "theme_certara"
  ],
  "_help": [
    {
      "page": "darwin_data",
      "title": "Initialize darwin data structure.",
      "topics": [
        "darwin_data"
      ]
    },
    {
      "page": "darwinReportUI",
      "title": "Generate and Report Model Diagnostics from NLME or NONMEM runs",
      "topics": [
        "darwinReportUI"
      ]
    },
    {
      "page": "fitness_penalties_vs_iteration",
      "title": "Plot minimum fitness by iteration with penalty composition.",
      "topics": [
        "fitness_penalties_vs_iteration"
      ]
    },
    {
      "page": "fitness_vs_iteration",
      "title": "Plot best fitness by iteration.",
      "topics": [
        "fitness_vs_iteration"
      ]
    },
    {
      "page": "get_eps_shk",
      "title": "Get eps shrinkage values 'xpose_data' object",
      "topics": [
        "get_eps_shk"
      ]
    },
    {
      "page": "get_eta_shk",
      "title": "Get eta shrinkage values from 'xpose_data' object",
      "topics": [
        "get_eta_shk"
      ]
    },
    {
      "page": "import_key_models",
      "title": "Imports files from key model output folders",
      "topics": [
        "import_key_models"
      ]
    },
    {
      "page": "summarise_fitness_by_iteration",
      "title": "Summarise fitness by iteration",
      "topics": [
        "summarise_fitness_by_iteration"
      ]
    },
    {
      "page": "summarise_fitness_penalties_by_iteration",
      "title": "Summarize minimum fitness and penalty values by iteration",
      "topics": [
        "summarise_fitness_penalties_by_iteration"
      ]
    },
    {
      "page": "summarise_overall_by_key_models",
      "title": "Summarise overall table by key models",
      "topics": [
        "summarise_overall_by_key_models"
      ]
    },
    {
      "page": "theme_certara",
      "title": "A ggplot2 theme for Certara.",
      "topics": [
        "theme_certara"
      ]
    }
  ],
  "_readme": "https://github.com/cran/Certara.DarwinReporter/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "assertthat",
    "backports",
    "base64enc",
    "bit",
    "bit64",
    "bslib",
    "cachem",
    "callr",
    "Certara.Xpose.NLME",
    "checkmate",
    "class",
    "classInt",
    "cli",
    "clipr",
    "colourpicker",
    "commonmark",
    "cpp11",
    "crayon",
    "crosstalk",
    "curl",
    "data.table",
    "digest",
    "dplyr",
    "DT",
    "e1071",
    "egg",
    "evaluate",
    "farver",
    "fastmap",
    "flextable",
    "fontawesome",
    "fontBitstreamVera",
    "fontLiberation",
    "fontquiver",
    "forcats",
    "fs",
    "gdtools",
    "generics",
    "GGally",
    "ggforce",
    "ggplot2",
    "ggstats",
    "glue",
    "gridExtra",
    "gtable",
    "highr",
    "hms",
    "htmltools",
    "htmlwidgets",
    "httpuv",
    "httr",
    "isoband",
    "jquerylib",
    "jsonlite",
    "KernSmooth",
    "knitr",
    "labeling",
    "later",
    "lattice",
    "lazyeval",
    "learnr",
    "lifecycle",
    "litedown",
    "magrittr",
    "markdown",
    "MASS",
    "Matrix",
    "memoise",
    "mime",
    "miniUI",
    "officer",
    "openssl",
    "otel",
    "patchwork",
    "pillar",
    "pkgconfig",
    "plotly",
    "polyclip",
    "prettyunits",
    "processx",
    "progress",
    "promises",
    "proxy",
    "ps",
    "purrr",
    "R.cache",
    "R.methodsS3",
    "R.oo",
    "R.utils",
    "R6",
    "ragg",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "readr",
    "renv",
    "rlang",
    "rmarkdown",
    "rprojroot",
    "S7",
    "sass",
    "scales",
    "shiny",
    "shinyAce",
    "shinyjqui",
    "shinyjs",
    "shinymeta",
    "shinyTree",
    "shinyWidgets",
    "sortable",
    "sourcetools",
    "stringi",
    "stringr",
    "styler",
    "survival",
    "sys",
    "systemfonts",
    "textshaping",
    "tibble",
    "tidyr",
    "tidyselect",
    "tinytex",
    "tweenr",
    "tzdb",
    "utf8",
    "uuid",
    "vctrs",
    "viridisLite",
    "vpc",
    "vroom",
    "withr",
    "xfun",
    "xml2",
    "xpose",
    "xtable",
    "yaml",
    "zip"
  ],
  "_score": 1.6989700043360187,
  "_indexed": true,
  "_nocasepkg": "certara.darwinreporter",
  "_universes": [
    "certara-jcraig",
    "certara"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "2.0.1",
      "date": "2026-05-31T08:06:34.000Z",
      "distro": "noble",
      "commit": "38fdff3bcca9031e592ccfea23111c74ff065962",
      "fileid": "4a8ca44d527264b1640d40b9d085424478ecd3378222120d2fe06784af9f1792",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/certara-jcraig/actions/runs/26707136882"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "2.0.1",
      "date": "2026-05-31T08:06:47.000Z",
      "distro": "noble",
      "commit": "38fdff3bcca9031e592ccfea23111c74ff065962",
      "fileid": "1123ae8c7202f8988d55bc8f3878cd65968c5ec9dc3d306473f77392278a0102",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/certara-jcraig/actions/runs/26707136882"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "2.0.1",
      "date": "2026-05-31T08:14:09.000Z",
      "commit": "38fdff3bcca9031e592ccfea23111c74ff065962",
      "fileid": "7c5df6ed47e923e7b132674a892641b9722de6169cdf81cf5adce7ec9cefdd90",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/certara-jcraig/actions/runs/26707136882"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "2.0.1",
      "date": "2026-05-31T08:18:49.000Z",
      "commit": "38fdff3bcca9031e592ccfea23111c74ff065962",
      "fileid": "a3b29e65854d90d98188cf462d0b4616c2fdb7222e3846e45740b84027d85d71",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/certara-jcraig/actions/runs/26707136882"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "2.0.1",
      "date": "2026-05-31T08:07:06.000Z",
      "commit": "38fdff3bcca9031e592ccfea23111c74ff065962",
      "fileid": "8833ad75df42f425da2eefa325e6fc1e88923849d3c206c37f81db636ca37bc5",
      "status": "success",
      "buildurl": "https://github.com/r-universe/certara-jcraig/actions/runs/26707136882"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "2.0.1",
      "date": "2026-05-31T08:05:12.000Z",
      "commit": "38fdff3bcca9031e592ccfea23111c74ff065962",
      "fileid": "b02f81e644b18f6dde24f85115d14785c35b2b90403e5c26e9b9a1e326cec098",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/certara-jcraig/actions/runs/26707136882"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "2.0.1",
      "date": "2026-05-31T08:05:40.000Z",
      "commit": "38fdff3bcca9031e592ccfea23111c74ff065962",
      "fileid": "182045728f15d3c66dcd868749ac9aa97eb0c75018a41ff19b94f107e02a84ad",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/certara-jcraig/actions/runs/26707136882"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "2.0.1",
      "date": "2026-05-31T08:05:13.000Z",
      "commit": "38fdff3bcca9031e592ccfea23111c74ff065962",
      "fileid": "f7630b66167ff1e647e0499978e7f00b8fb9b672ea1365d318fc5a60af6c0af4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/certara-jcraig/actions/runs/26707136882"
    }
  ]
}